Index

_

__repr__() (hnn_core.Cell method) (hnn_core.CellResponse method) (hnn_core.extracellular.ExtracellularArray method) (hnn_core.Network method) (hnn_core.optimization.Optimizer method)

A

add_bursty_drive() (hnn_core.Network method) add_connection() (hnn_core.Network method) add_drive_widget() (hnn_core.gui.HNNGUI method) add_electrode_array() (hnn_core.Network method)

add_evoked_drive() (hnn_core.Network method) add_poisson_drive() (hnn_core.Network method) add_tonic_bias() (hnn_core.Network method) analysis_config (hnn_core.gui.HNNGUI property) average_dipoles() (in module hnn_core.dipole)

B

build() (hnn_core.Cell method)

C

calcium_model() (in module hnn_core) capture() (hnn_core.gui.HNNGUI method) Cell (class in hnn_core) cell_types (hnn_core.CellResponse property) CellResponse (class in hnn_core) clear_connectivity() (hnn_core.Network method)

clear_drives() (hnn_core.Network method) compose() (hnn_core.gui.HNNGUI method) copy() (hnn_core.Cell method) (hnn_core.dipole.Dipole method) (hnn_core.extracellular.ExtracellularArray method) (hnn_core.Network method) create_tonic_bias() (hnn_core.Cell method)

D

data (hnn_core.gui.HNNGUI property) define_shape() (hnn_core.Cell method) Dipole (class in hnn_core.dipole)

distal distance_section() (hnn_core.Cell method) drive

E

export_movie() (hnn_core.viz.NetworkPlotter method)

ExtracellularArray (class in hnn_core.extracellular)

F

fit() (hnn_core.optimization.Optimizer method)

G

get_cell_parameters_dict() (hnn_core.gui.HNNGUI method)

gid gid_to_type() (hnn_core.Network method)

H

HNNGUI (class in hnn_core.gui)

J

JoblibBackend (class in hnn_core.parallel_backends)

jones_2009_model() (in module hnn_core)

L

law_2021_model() (in module hnn_core)

load_drive_and_connectivity() (hnn_core.gui.HNNGUI method) load_parameters() (hnn_core.gui.HNNGUI static method)

M

mean_rates() (hnn_core.CellResponse method)

modify_section() (hnn_core.Cell method) MPIBackend (class in hnn_core.parallel_backends)

N

Network (class in hnn_core)

NetworkPlotter (class in hnn_core.viz)

O

Optimizer (class in hnn_core.optimization)

P

parconnect_from_src() (hnn_core.Cell method) pick_connection() (in module hnn_core) plot() (hnn_core.dipole.Dipole method) plot_cell_connectivity() (in module hnn_core.viz) plot_cell_morphology() (in module hnn_core.viz) plot_cells() (hnn_core.Network method) (in module hnn_core.viz) plot_connectivity_matrix() (in module hnn_core.viz) plot_convergence() (hnn_core.optimization.Optimizer method) plot_csd() (hnn_core.extracellular.ExtracellularArray method) plot_dipole() (in module hnn_core.viz) plot_laminar_csd() (in module hnn_core.viz)

plot_laminar_lfp() (in module hnn_core.viz) plot_lfp() (hnn_core.extracellular.ExtracellularArray method) plot_morphology() (hnn_core.Cell method) plot_psd() (hnn_core.dipole.Dipole method) (in module hnn_core.viz) plot_spikes_hist() (hnn_core.CellResponse method) (in module hnn_core.viz) plot_spikes_raster() (hnn_core.CellResponse method) (in module hnn_core.viz) plot_tfr_morlet() (hnn_core.dipole.Dipole method) (in module hnn_core.viz) proximal

R

read_dipole() (in module hnn_core) read_params() (in module hnn_core)

read_spikes() (in module hnn_core) record() (hnn_core.Cell method) run_notebook_cells() (hnn_core.gui.HNNGUI method)

S

savgol_filter() (hnn_core.dipole.Dipole method) scale() (hnn_core.dipole.Dipole method) set_cell_positions() (hnn_core.Network method) setup_source_netcon() (hnn_core.Cell method) sfreq (hnn_core.extracellular.ExtracellularArray property) simulate() (hnn_core.parallel_backends.JoblibBackend method) (hnn_core.parallel_backends.MPIBackend method)

simulate_dipole() (in module hnn_core) smooth() (hnn_core.dipole.Dipole method) (hnn_core.extracellular.ExtracellularArray method) spike_times_by_type (hnn_core.CellResponse property) syn_create() (hnn_core.Cell method)

T

terminate() (hnn_core.parallel_backends.MPIBackend method) to_dict() (hnn_core.Cell method) (hnn_core.CellResponse method) (hnn_core.extracellular.ExtracellularArray method)

U

update_types() (hnn_core.CellResponse method)

update_weights() (hnn_core.Network method)

W

write() (hnn_core.CellResponse method) (hnn_core.dipole.Dipole method)

write_configuration() (hnn_core.Network method)