Tutorials¶
The following tutorials contain the workflow and code to simulate and visualize commonly studied M/EEG signals including event related potentials and low frequency rhythms in the alpha, beta and gamma bands. The tutorial workflows, and all parameter values used, are based on the detailed tutorials provided on the HNN GUI website, and reproduce a subset of examples and figures in the more elaborated GUI tutorials using the HNN-core API.
We strongly recommend that you first go through the background information provided on the HNN website and each of the HNN GUI tutorials, after which the code and instructions in these HNN-core tutorials will be clearer. All tutorials build from our prior publications investigating the origin of ERPs and brain rhythms in the somatosensory system, and parameter and data sets are provided to help users get started.
01. Simulate Event Related Potentials (ERPs)
02. Simulate Alpha and Beta Rhythms
04. From MEG sensor-space data to HNN simulation
05. Simulate beta modulated ERP
How to¶
These are short examples that show how to use HNN-core API to accomplish specific tasks.
02. Record extracellular potentials
03. Modifying local connectivity
04. Use MPI backend for parallelization
05. Optimize simulated evoked response parameters
08. Optimize simulated rhythmic responses