hnn_core.simulate_dipole¶

hnn_core.simulate_dipole(net, tstop, dt=0.025, n_trials=None, record_vsoma=False, record_isoma=False, postproc=False)[source]¶

Simulate a dipole given the experiment parameters.

Parameters

netNetwork object: The Network object specifying how cells are connected.
tstopfloat: The simulation stop time (ms).
dtfloat: The integration time step of h.CVode (ms)
n_trialsint | None: The number of trials to simulate. If None, the ‘N_trials’ value of the params used to create net is used (must be >0)
record_vsomabool: Option to record somatic voltages from cells
record_isomabool: Option to record somatic currents from cells
postprocbool: If True, smoothing (dipole_smooth_win) and scaling (dipole_scalefctr) values are read from the parameter file, and applied to the dipole objects before returning. Note that this setting only affects the dipole waveforms, and not somatic voltages, possible extracellular recordings etc. The preferred way is to use the smooth() and scale() methods instead. Default: False.

Returns

dpls: list: List of dipole objects for each trials